SOM cluster: 1110

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 366
Promoter: 6%
CpG-Island: 0%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 26/100 | e-val: 0.046
Factore-val(match)DB
NR1H2::RXRA0.0000000015638JASPAR
HNF4A0.0000000028941JASPAR
NR2F10.000000033855JASPAR
PPARG::RXRA0.00000010364JASPAR
NR4A20.00000010973JASPAR

BED file downloads

Download top of 366 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 204453060-204453210PIK3C2B33.77
chr1: 61584860-61585010NFIA42.67
chr3: 37934365-37934515ITGA945.25
chr3: 37934365-37934515CTDSPL45.25
chr3: 37934365-37934515AC093415.245.25
chr9: 36345400-36345550RNF3845.84
chr8: 6418440-6418590ANGPT247.36
chr1: 154474185-154474335SHE47.93
chr3: 196562120-196562270PAK254.04
chr13: 113838280-113838430KARSP258.28
View top connections.

Other

CodePlot