SOM cluster: 1355

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 16486
Promoter: 3%
CpG-Island: 4%
Conserved: 10%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 10/100 | e-val: 0.32
Factore-val(match)DB
Sox20.000022467JASPAR
Foxd30.000060974JASPAR
Pou5f10.000072344JASPAR
Foxq10.0012775JASPAR
FOXF20.0039965JASPAR
Sites: 15/100 | e-val: 0.71
Factore-val(match)DB
HNF1B0.0000000067556JASPAR
HNF1A0.00000013894JASPAR
Lhx30.000013766JASPAR
ARID3A0.00024209JASPAR
FOXO30.00067873JASPAR

BED file downloads

Download top of 16486 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150501320-150501470LINC0056813.02
chr1: 146682645-146682795FMO513.02
chr1: 146682645-146682795PDIA3P113.02
chr1: 146682645-146682795CCT8P113.02
chr1: 151080005-151080155GABPB228.57
chr7: 50596520-50596670DDC32.47
chr16: 89688540-89688690SPATA2L34.43
chr16: 89688540-89688690CDK1034.43
chr16: 89688540-89688690DPEP134.43
chr3: 126184365-126184515CHST1334.9
View top connections.

Other

CodePlot