SOM cluster: 1373

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 229
Promoter: 45%
CpG-Island: 85%
Conserved: 81%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 0
Factore-val(match)DB
SP10.0000049409JASPAR
TFAP2A0.00014499JASPAR
Egr10.0042093JASPAR
Klf40.016955JASPAR
Pax50.027996JASPAR
Sites: 81/100 | e-val: 1.8e-39
Factore-val(match)DB
SP10.0000070642JASPAR
TFAP2A0.00094501JASPAR
Klf40.0010611JASPAR
PLAG10.0070197JASPAR
Zfx0.01472JASPAR
Sites: 43/100 | e-val: 0.00000025
Factore-val(match)DB
SP10.00010732JASPAR
TFAP2A0.00015603JASPAR
Zfx0.0085929JASPAR
Egr10.020219JASPAR
GABPA0.045318JASPAR

BED file downloads

Download top of 229 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr14: 53417645-53417795RP11-368P15.350.04
chr4: 184019660-184019810WWC254.59
chr3: 128207900-128208050TMED10P255.6
chr3: 128207900-128208050RP11-475N22.455.6
chr3: 128207900-128208050GATA255.6
chr3: 133614605-133614755RAB6B58.56
chr3: 133614605-133614755C3orf3658.56
chr5: 74349520-74349670GCNT459.17
chr5: 74349520-74349670RP11-229C3.259.17
chr8: 22857705-22857855RN7SL303P60.36
View top connections.

Other

CodePlot