SOM cluster: 1378

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 178
Promoter: 3%
CpG-Island: 0%
Conserved: 36%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 49/100 | e-val: 0.0000000000032
Factore-val(match)DB
NFE2L20.0000000041671JASPAR
AP10.00000059878JASPAR
NFE2L1::MafG0.00014984JASPAR
Pdx10.0010519JASPAR
HOXA50.0032319JASPAR

BED file downloads

Download top of 178 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 138610200-138610350C3orf7246.56
chr3: 138610200-138610350ATP5G1P346.56
chr3: 138610200-138610350RPL23AP4046.56
chrX: 16607480-16607630RN7SL658P50.79
chr8: 79438080-79438230PKIA57.95
chr12: 76654200-76654350BBS1058.47
chr12: 76654200-76654350RN7SKP17258.47
chr12: 76654200-76654350RP11-54A9.158.47
chr3: 27649060-27649210AC098614.359.16
chr2: 162949360-162949510GCG61.7
View top connections.

Other

CodePlot