SOM cluster: 1398

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 140
Promoter: 3%
CpG-Island: 0%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 19/100 | e-val: 0.00013
Factore-val(match)DB
EWSR1-FLI10.000032251JASPAR
SP10.0011962JASPAR
Spz10.0045243JASPAR
IRF20.0068426JASPAR
NFKB10.016168JASPAR

BED file downloads

Download top of 140 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 183174740-183174890RP11-548N1.134.82
chr1: 183174740-183174890LAMC134.82
chr4: 88939760-88939910PKD245.6
chr4: 88939760-88939910ABCG245.6
chr17: 48110780-48110930PDK253.62
chr17: 48110780-48110930RP11-1094H24.453.62
chr5: 1568920-1569070LPCAT157.67
chr8: 99371020-99371170NIPAL262.89
chr8: 99371020-99371170KCNS262.89
chr17: 65285885-65286035HELZ63.46
View top connections.

Other

CodePlot