SOM cluster: 1670

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 406
Promoter: 1%
CpG-Island: 0%
Conserved: 28%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.0000025
Factore-val(match)DB
ARID3A0.0016105JASPAR
Prrx20.0026695JASPAR
HNF1B0.0047718JASPAR
Foxd30.0057527JASPAR
Lhx30.0062789JASPAR
Sites: 19/100 | e-val: 0.13
Factore-val(match)DB
MEF2A0.0000000029936JASPAR
HNF1A0.0029849JASPAR
FOXI10.0073899JASPAR
HNF1B0.0097056JASPAR
FOXO30.011795JASPAR

BED file downloads

Download top of 406 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 41226780-41226930CITED444.75
chr1: 41226780-41226930MIR30C144.75
chr1: 41226780-41226930NFYC44.75
chr1: 193252240-193252390B3GALT250.17
chr1: 178027120-178027270RASAL2-AS153.21
chr2: 136549480-136549630MCM653.53
chr2: 136549480-136549630R3HDM153.53
chr12: 15905860-15906010EPS853.6
chr15: 85964480-85964630ADAMTS7P454.06
chr4: 148897120-148897270ARHGAP1054.62
View top connections.

Other

CodePlot