SOM cluster: 1813

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 129
Promoter: 3%
CpG-Island: 1%
Conserved: 66%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.0000000000000091
Factore-val(match)DB
SOX100.0000072571JASPAR
SOX90.000054579JASPAR
MEF2A0.0005532JASPAR
SRY0.00073393JASPAR
Sox20.00092115JASPAR
Sites: 35/100 | e-val: 0.00012
Factore-val(match)DB
RREB10.000010934JASPAR
RUNX10.00003307JASPAR
Tcfcp2l10.000088551JASPAR
Pax40.0025166JASPAR
ZNF354C0.0044158JASPAR

BED file downloads

Download top of 129 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 20060860-20061010ATP6V1B253.8
chr8: 20060860-20061010LZTS153.8
chr4: 174369880-174370030SCRG156.5
chr3: 37225580-37225730AC097359.261.26
chr3: 37225580-37225730LRRFIP261.26
chr3: 37225580-37225730AC097359.161.26
chr3: 37225580-37225730UBE2FP161.26
chr4: 154088360-154088510TRIM266.13
chr4: 129484380-129484530RP11-184M15.172.58
chr17: 58821220-58821370BCAS375.69
View top connections.

Other

CodePlot