SOM cluster: 1890

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2757
Promoter: 0%
CpG-Island: 0%
Conserved: 20%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.63
Factore-val(match)DB
ARID3A0.000057421JASPAR
Nkx2-50.0016111JASPAR
Prrx20.0019237JASPAR
Lhx30.0020454JASPAR
Pdx10.0096631JASPAR
Sites: 15/100 | e-val: 0.37
Factore-val(match)DB
NFATC20.00016097JASPAR
EWSR1-FLI10.00097001JASPAR
IRF10.0042807JASPAR
FEV0.011374JASPAR
Lhx30.012327JASPAR

BED file downloads

Download top of 2757 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151381460-151381610POGZ33.94
chr1: 150449120-150449270LINC0056839.67
chr12: 76056340-76056490RP11-25J3.244.35
chr15: 101664340-101664490LRRK144.56
chr8: 16040400-16040550RP11-447G11.144.91
chr4: 175500740-175500890GLRA346.01
chr17: 66261720-66261870SLC16A646.28
chr8: 16970580-16970730RP11-468H14.147.47
chr11: 27009420-27009570FIBIN50.94
chr9: 118748840-118748990RP11-787B4.252.55
View top connections.

Other

CodePlot