SOM cluster: 2207

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 7596
Promoter: 2%
CpG-Island: 0%
Conserved: 23%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 37/100 | e-val: 5.5e-18
Factore-val(match)DB
HNF1A2.2204e-16JASPAR
HNF1B0.000000000000010103JASPAR
Lhx30.0000053355JASPAR
Prrx20.00014202JASPAR
NKX3-10.0021549JASPAR
Sites: 25/100 | e-val: 0.28
Factore-val(match)DB
MEF2A0.0002133JASPAR
Lhx30.0019975JASPAR
Pax40.0053611JASPAR
Foxd30.006613JASPAR
Sox20.019553JASPAR

BED file downloads

Download top of 7596 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150965240-150965390CERS213.14
chr1: 150965240-150965390FAM63A13.14
chr1: 147172520-147172670ACP614.45
chr7: 38969300-38969450VPS4124.71
chr1: 81000780-81000930RP5-887A10.132.99
chr11: 20063160-20063310NAV2-AS233.37
chr11: 17070160-17070310OR7E14P37.51
chr1: 159309480-159309630OR10J339.36
chr8: 121054380-121054530DEPTOR39.45
chr15: 96864380-96864530NR2F239.94
View top connections.

Other

CodePlot