SOM cluster: 2266

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 270
Promoter: 4%
CpG-Island: 0%
Conserved: 23%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 44/100 | e-val: 0.000000000001
Factore-val(match)DB
FEV0.0000000043951JASPAR
SPI10.00000001049JASPAR
ELK40.000000060782JASPAR
GABPA0.00000097786JASPAR
ELF50.000016051JASPAR
Sites: 15/100 | e-val: 0.018
Factore-val(match)DB
IRF10.00016518JASPAR
IRF20.00070297JASPAR
Foxd30.00078473JASPAR
Sox20.0018194JASPAR
NFATC20.0033404JASPAR
Sites: 22/100 | e-val: 0.093
Factore-val(match)DB
RUNX10.000017034JASPAR
NHLH10.00040591JASPAR
ZEB10.0022366JASPAR
Myf0.0042857JASPAR
SOX100.007124JASPAR

BED file downloads

Download top of 270 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 64648300-64648450EHD139.44
chr11: 64648300-64648450MAP4K239.44
chr11: 64648300-64648450CDC42BPG39.44
chr1: 156127420-156127570LMNA45.37
chr1: 156127420-156127570SEMA4A45.37
chr1: 156127420-156127570PAQR645.37
chr1: 156127420-156127570SMG545.37
chr1: 156127420-156127570SLC25A4445.37
chr10: 90747160-90747310ACTA2-AS148.6
chr5: 150576220-150576370ANXA651.79
View top connections.

Other

CodePlot