SOM cluster: 2320

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 198
Promoter: 4%
CpG-Island: 0%
Conserved: 67%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 71/100 | e-val: 0.000000000000023
Factore-val(match)DB
Lhx30.00029228JASPAR
HNF1A0.00045883JASPAR
MEF2A0.0023675JASPAR
Pou5f10.0038192JASPAR
Foxd30.0086709JASPAR
Sites: 19/100 | e-val: 0.00055
Factore-val(match)DB
SPIB0.0002431JASPAR
Foxd30.00027553JASPAR
NFATC20.0094545JASPAR
FOXI10.010166JASPAR
EWSR1-FLI10.012815JASPAR

BED file downloads

Download top of 198 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 38756540-38756690PLEKHA237.02
chr8: 38756540-38756690RP11-723D22.237.02
chr8: 38756540-38756690ADAM937.02
chr8: 38756540-38756690CTD-2544N14.337.02
chr8: 38756540-38756690TM2D237.02
chr8: 38756540-38756690RP11-723D22.337.02
chr8: 18836820-18836970SNORA6237.59
chr1: 156771120-156771270RRNAD152.19
chr1: 156771120-156771270ISG20L252.19
chr1: 156771120-156771270CRABP252.19
View top connections.

Other

CodePlot