SOM cluster: 2321

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 208
Promoter: 1%
CpG-Island: 0%
Conserved: 69%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/100 | e-val: 0.00000035
Factore-val(match)DB
HNF1B0.0000040145JASPAR
MEF2A0.000039967JASPAR
Foxd30.000060587JASPAR
Lhx30.0005016JASPAR
FOXI10.0029388JASPAR
Sites: 29/100 | e-val: 0.000051
Factore-val(match)DB
Sox20.00037399JASPAR
Foxq10.0004265JASPAR
SPIB0.00047911JASPAR
Pou5f10.00089262JASPAR
NFATC20.0024239JASPAR

BED file downloads

Download top of 208 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 126340880-126341030TXNRD352.82
chr3: 126340880-126341030TXNRD3NB52.82
chr8: 77493860-77494010ZFHX459.35
chr8: 36937180-36937330AC090453.165.7
chr3: 42392725-42392875CCK72.35
chr3: 42392725-42392875EIF4BP472.35
chr3: 190222620-190222770IL1RAP73.87
chr7: 91506120-91506270AKAP974.35
chr7: 77507160-77507310TMEM6074.44
chr7: 77507160-77507310PHTF274.44
View top connections.

Other

CodePlot