SOM cluster: 2461

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 124
Promoter: 8%
CpG-Island: 2%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 62/100 | e-val: 0
Factore-val(match)DB
HNF1A0.0000000000000073275JASPAR
HNF1B0.000000000014317JASPAR
ARID3A0.0025863JASPAR
NR1H2::RXRA0.0035152JASPAR
Lhx30.0055857JASPAR

BED file downloads

Download top of 124 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 121821940-121822090SNTB139.04
chr6: 11217740-11217890NEDD949.47
chr17: 70614385-70614535SLC39A1150.94
chr11: 34360880-34361030RP1-53C18.352.65
chr1: 204183040-204183190GOLT1A53.16
chr11: 75497580-75497730DGAT254.36
chr5: 176805960-176806110RAB2456.53
chr13: 47182000-47182150LRCH161.43
chr17: 46639740-46639890HOXB-AS362.11
chr5: 1106080-1106230SLC12A762.38
View top connections.

Other

CodePlot