SOM cluster: 30

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 664
Promoter: 5%
CpG-Island: 0%
Conserved: 53%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 24/100 | e-val: 0.00000013
Factore-val(match)DB
RUNX10.0000057203JASPAR
Pdx10.00032405JASPAR
MYC::MAX0.0005292JASPAR
Prrx20.0010272JASPAR
ZNF354C0.01338JASPAR
Sites: 32/100 | e-val: 0.00000026
Factore-val(match)DB
NFE2L20.0000000000064161JASPAR
AP10.000000001348JASPAR
NFE2L1::MafG0.00009334JASPAR
Foxa20.002569JASPAR
PBX10.0087067JASPAR
Sites: 14/100 | e-val: 0.21
Factore-val(match)DB
RUNX10.00049604JASPAR
SPIB0.0022954JASPAR
FEV0.0096661JASPAR
SP10.018551JASPAR
SPI10.019485JASPAR
Sites: 20/100 | e-val: 0.017
Factore-val(match)DB
IRF10.000005645JASPAR
IRF20.000029715JASPAR
NR1H2::RXRA0.00015958JASPAR
FOXA10.0056957JASPAR
Foxa20.020316JASPAR

BED file downloads

Download top of 664 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 117128760-117128910RP11-9M16.240.23
chr9: 117453440-117453590C9orf9140.88
chr12: 111028740-111028890HVCN141.98
chr6: 25962640-25962790TRIM3842.04
chr6: 25962640-25962790SLC17A242.04
chr8: 116439960-116440110TRPS145.27
chr17: 74511480-74511750RPL7P4953.72
chr17: 74511480-74511750ST6GALNAC253.72
chr17: 74511480-74511750SNHG1653.72
chr17: 74511480-74511750UBE2O53.72
View top connections.

Other

CodePlot