SOM cluster: 337

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 176
Promoter: 51%
CpG-Island: 19%
Conserved: 73%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 20/100 | e-val: 0.0000000000016
Factore-val(match)DB
CTCF0.0000000000000015543JASPAR
NFATC20.00056867JASPAR
SRF0.0034883JASPAR
TAL1::TCF30.0043706JASPAR
Zfp4230.0078227JASPAR
Sites: 41/100 | e-val: 0.000000085
Factore-val(match)DB
IRF10.00078293JASPAR
NFATC20.0021298JASPAR
FOXA10.0022266JASPAR
Foxa20.0024001JASPAR
IRF20.0041034JASPAR

BED file downloads

Download top of 176 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145507780-145507930PEX11B13.92
chr1: 145507780-145507930NUDT1713.92
chr1: 204475540-204475690PIK3C2B39.09
chr3: 169489900-169490050LRRC3141.33
chr1: 169763780-169763930SCYL350.76
chr1: 169763780-169763930C1orf11250.76
chr1: 169763780-169763930METTL1850.76
chr6: 52281460-52281610PAQR856.67
chr12: 98897360-98897510TMPO-AS160.71
chr12: 98897360-98897510SLC25A360.71
View top connections.

Other

CodePlot