SOM cluster: 342

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 130
Promoter: 23%
CpG-Island: 12%
Conserved: 68%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 69/100 | e-val: 0
Factore-val(match)DB
CTCF0.0000000000013962JASPAR
INSM10.00000038021JASPAR
SP10.0016028JASPAR
MYC::MAX0.0064947JASPAR
Zfp4230.020748JASPAR
Sites: 47/100 | e-val: 0.0000000000000031
Factore-val(match)DB
EWSR1-FLI10.0000000000018539JASPAR
SP10.000017177JASPAR
Pax40.0023553JASPAR
Tal1::Gata10.010606JASPAR
MZF1_1-40.016579JASPAR

BED file downloads

Download top of 130 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr13: 28107340-28107490GTF3A28.91
chr16: 3207425-3207575ZNF21360.67
chr4: 125634560-125634710ANKRD5061.68
chr11: 66247405-66247555MRPL1162.58
chr16: 3162465-3162615IL3263.01
chr16: 3162465-3162615ZNF20563.01
chr16: 3162465-3162615TNFRSF12A63.01
chr16: 3162465-3162615MMP2563.01
chr11: 75039820-75039970ARRB166.06
chr8: 142138040-142138190SLC45A466.48
View top connections.

Other

CodePlot