SOM cluster: 422

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 186
Promoter: 40%
CpG-Island: 73%
Conserved: 60%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 92/100 | e-val: 0
Factore-val(match)DB
SP10.000000038364JASPAR
Egr10.0026579JASPAR
TFAP2A0.0072082JASPAR
PLAG10.007671JASPAR
Pax40.013953JASPAR
Sites: 71/100 | e-val: 2.4e-17
Factore-val(match)DB
SP10.00000056247JASPAR
Tal1::Gata10.0011884JASPAR
TFAP2A0.0011887JASPAR
PLAG10.0014773JASPAR
EWSR1-FLI10.0014832JASPAR

BED file downloads

Download top of 186 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 151574620-151574770PRKAG2-AS147.68
chr16: 88753200-88753350SNAI353.92
chr11: 64510700-64510850RASGRP255.18
chr11: 64510700-64510850MAP4K255.18
chr19: 34288120-34288270KCTD1555.63
chr6: 39196920-39197070KCNK556.06
chr19: 10812480-10812630SLC44A257.71
chr19: 10812480-10812630QTRT157.71
chr9: 131465440-131465590PKN358.29
chr9: 131465440-131465590VTI1BP458.29
View top connections.

Other

CodePlot