SOM cluster: 533

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 309
Promoter: 70%
CpG-Island: 12%
Conserved: 22%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/100 | e-val: 0.0057
Factore-val(match)DB
ARID3A0.00071942JASPAR
Foxd30.0026669JASPAR
NFATC20.0052341JASPAR
Evi10.0056053JASPAR
IRF10.0060282JASPAR

BED file downloads

Download top of 309 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150459485-150459635RPRD214.5
chr1: 150459485-150459635ECM114.5
chr1: 150459485-150459635TARS214.5
chr1: 150459485-150459635ADAMTSL414.5
chr1: 151300385-151300535RP11-126K1.834.51
chr1: 151300385-151300535RP11-126K1.234.51
chr1: 151300385-151300535ZNF68734.51
chr1: 151300385-151300535PSMB434.51
chr8: 56987360-56987510RPS2036.51
chr3: 32726340-32726490RPL30P441.64
View top connections.

Other

CodePlot