SOM cluster: 829

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 502
Promoter: 0%
CpG-Island: 0%
Conserved: 49%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 41/100 | e-val: 0.00000000000045
Factore-val(match)DB
NR1H2::RXRA0.0055277JASPAR
HNF1B0.0099722JASPAR
ARID3A0.013708JASPAR
Pax40.021247JASPAR
NFATC20.025823JASPAR
Sites: 25/100 | e-val: 0.0091
Factore-val(match)DB
NFATC20.00000000016968JASPAR
Foxa20.0013198JASPAR
znf1430.0018089JASPAR
FOXA10.0038588JASPAR
Pou5f10.0050229JASPAR

BED file downloads

Download top of 502 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 53808980-53809130TMEM10039.09
chr8: 19562380-19562530CSGALNACT141.85
chr8: 93074040-93074190RUNX1T146.63
chr8: 97623820-97623970CPQ47.23
chr1: 77872440-77872590AK548.49
chr9: 129161720-129161870MVB12B52.4
chr12: 27681800-27681950RP11-709A23.253.09
chr12: 27681800-27681950PPFIBP153.09
chr20: 1842000-1842150SIRPA54.15
chr5: 102310900-102311050PAM55
View top connections.

Other

CodePlot