SOM cluster: 836

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 419
Promoter: 12%
CpG-Island: 16%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 83/100 | e-val: 0
Factore-val(match)DB
RREB10.0000000058853JASPAR
SP10.00000040292JASPAR
Pax40.000052016JASPAR
INSM10.0021648JASPAR
Klf40.0031327JASPAR
Sites: 57/100 | e-val: 0.000000000011
Factore-val(match)DB
Myf0.0001863JASPAR
CTCF0.00049726JASPAR
RREB10.0024154JASPAR
SP10.003791JASPAR
PLAG10.016477JASPAR

BED file downloads

Download top of 419 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr22: 45638700-45638850KIAA093034.75
chr8: 10586180-10586330CTD-2135J3.338.09
chr8: 10586180-10586330SOX738.09
chr9: 131465965-131466115VTI1BP451.34
chr9: 131465965-131466115PKN351.34
chr9: 131465965-131466115HMGA1P451.34
chr8: 19614160-19614310CSGALNACT154.74
chr8: 19614160-19614310RP11-1105O14.154.74
chr19: 14584305-14584455DNAJB155.12
chr15: 85361385-85361535ALPK356.05
View top connections.

Other

CodePlot