SOM cluster: 852

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 802
Promoter: 2%
CpG-Island: 1%
Conserved: 46%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 1.6e-34
Factore-val(match)DB
SPIB0.0010268JASPAR
Prrx20.012968JASPAR
GATA20.02022JASPAR
Pdx10.042582JASPAR
NFKB10.057366JASPAR

BED file downloads

Download top of 802 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 53608280-53608430SLC1A737.92
chr1: 159908080-159908230IGSF946.2
chr17: 1456820-1456970PITPNA49.31
chr3: 154316060-154316210CTD-2501O3.250.8
chr3: 47577880-47578030CSPG554.79
chr8: 10389880-10390030RP1L157.71
chr5: 159689280-159689430FABP663.26
chr7: 105784300-105784450SYPL168.26
chr12: 53350940-53351090KRT1871.97
chr12: 53350940-53351090RPL7P4171.97
View top connections.

Other

CodePlot