SOM cluster: 870

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 214
Promoter: 5%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 58/100 | e-val: 2.94273e-44
Factore-val(match)DB
SPI10.0000000052913JASPAR
FEV0.000000045203JASPAR
GABPA0.0000030958JASPAR
ELF50.000018028JASPAR
SPIB0.000045271JASPAR
Sites: 30/100 | e-val: 0.000034
Factore-val(match)DB
RUNX10.000000007333JASPAR
ZNF354C0.000080403JASPAR
RREB10.00056981JASPAR
MYC::MAX0.0014648JASPAR
MAX0.0039149JASPAR
Sites: 33/100 | e-val: 0.000083
Factore-val(match)DB
Pax40.0000020027JASPAR
RREB10.0000065293JASPAR
SP10.0000086403JASPAR
Tal1::Gata10.0012703JASPAR
ESR10.0015571JASPAR

BED file downloads

Download top of 214 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 229673800-229673950RNU4-21P32.66
chr1: 229673800-229673950URB232.66
chr11: 124540740-124540890SPA1740.31
chr11: 124540740-124540890SIAE40.31
chr11: 124540740-124540890RP11-677M14.340.31
chr3: 53206200-53206350RFT143.26
chr3: 53206200-53206350PRKCD43.26
chrX: 65225400-65225550RP6-159A1.343.75
chrX: 65225400-65225550MIR22343.75
chrX: 65225400-65225550RP6-159A1.243.75
View top connections.

Other

CodePlot