SOM cluster: 978

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 401
Promoter: 39%
CpG-Island: 9%
Conserved: 46%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 19/100 | e-val: 0.5
Factore-val(match)DB
SPIB0.000008394JASPAR
EWSR1-FLI10.000051369JASPAR
NFATC20.00050279JASPAR
FOXF20.0013422JASPAR
IRF10.0042673JASPAR

BED file downloads

Download top of 401 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 158620865-158621015WDR6054.02
chr11: 111474200-111474350RN7SKP27356.11
chr15: 96879965-96880115NR2F256.23
chr15: 96879965-96880115RP11-522B15.456.23
chr1: 202775520-202775670RABIF56.91
chr7: 107220105-107220255BCAP2957.17
chr7: 107220105-107220255COG557.17
chr7: 107220105-107220255WBP1LP257.17
chr4: 146402300-146402450SMAD1-AS158.86
chr4: 146402300-146402450SMAD158.86
View top connections.

Other

CodePlot