SOM cluster: 999

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 235
Promoter: 1%
CpG-Island: 0%
Conserved: 63%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 19/100 | e-val: 0.0000000012
Factore-val(match)DB
Foxd30.000019962JASPAR
FOXI10.00024051JASPAR
Foxq10.0005496JASPAR
MEF2A0.0017517JASPAR
FOXA10.00396JASPAR
Sites: 36/100 | e-val: 0.0000034
Factore-val(match)DB
RUNX10.0000005559JASPAR
RREB10.00030536JASPAR
ZNF354C0.002257JASPAR
Tcfcp2l10.0067999JASPAR
IRF20.014195JASPAR
Sites: 37/100 | e-val: 0.00022
Factore-val(match)DB
TEAD10.0000000064918JASPAR
znf1430.00045671JASPAR
REL0.00055966JASPAR
NF-kappaB0.00098468JASPAR
NFATC20.0035049JASPAR

BED file downloads

Download top of 235 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149958540-149958690BOLA118.93
chr1: 149958540-149958690MTMR1118.93
chr1: 149958540-149958690HIST2H2AB18.93
chr1: 149958540-149958690SV2A18.93
chr1: 149958540-149958690OTUD7B18.93
chr7: 65732400-65732550TPST151.09
chr20: 21164020-21164170RP4-777D9.253.67
chr18: 2881660-2881810SMCHD158.64
chr11: 9809840-9809990SBF2-AS160.52
chr17: 29596640-29596790NF161.08
View top connections.

Other

CodePlot