Gene: CDX1
chr5: 149546357-149564120Expression Profile
(log scale)Graphical Connections
Distribution of linked clusters:
You may find it interesting if many of the connected DHS sites belong to the same cluster.Cluster Profile | Cluster ID | Number of DHS sites in this cluster |
---|---|---|
1132 | 4 | |
2037 | 4 | |
1375 | 3 | |
2052 | 3 | |
1523 | 3 | |
1758 | 3 | |
655 | 3 | |
1180 | 2 | |
2293 | 2 | |
1750 | 2 | |
1796 | 2 | |
1000 | 2 | |
1002 | 2 | |
1474 | 1 | |
957 | 1 | |
1150 | 1 | |
10 | 1 | |
1244 | 1 | |
311 | 1 | |
1692 | 1 | |
1630 | 1 | |
1433 | 1 | |
1592 | 1 | |
1611 | 1 | |
1347 | 1 | |
1526 | 1 | |
927 | 1 | |
2156 | 1 | |
2104 | 1 | |
203 | 1 | |
958 | 1 | |
1447 | 1 | |
1835 | 1 | |
2055 | 1 | |
1704 | 1 | |
1770 | 1 | |
1057 | 1 | |
2333 | 1 | |
104 | 1 | |
2453 | 1 | |
2351 | 1 | |
1528 | 1 |
Resources
BED file downloads
Connects to 64 DHS sitesTop 10 Correlated DHS Sites
p-values indiciate significant higher or lower correlationLocation | Cluster | P-value |
---|---|---|
chr5:149593880-149594030 | 1523 | 0 |
chr5:149594045-149594195 | 1523 | 0 |
chr5:149511980-149512130 | 2351 | 0.001 |
chr5:149593220-149593370 | 1447 | 0.001 |
chr5:149487865-149488015 | 2156 | 0.001 |
chr5:149594280-149594430 | 1132 | 0.001 |
chr5:149468400-149468550 | 1750 | 0.002 |
chr5:149535625-149535775 | 2453 | 0.002 |
chr5:149537840-149537990 | 1002 | 0.002 |
chr5:149560280-149560430 | 1375 | 0.002 |
chr5:149523300-149523450 | 2293 | 0.004 |
External Databases
UCSCEnsembl (ENSG00000113722)