Gene: PTPN1
chr20: 49126890-49201299Expression Profile
(log scale)
Graphical Connections
Distribution of linked clusters:
You may find it interesting if many of the connected DHS sites belong to the same cluster.| Cluster Profile | Cluster ID | Number of DHS sites in this cluster |
|---|---|---|
 | 1855 | 6 |
 | 2207 | 5 |
 | 2211 | 3 |
 | 1347 | 3 |
 | 1605 | 3 |
 | 2290 | 3 |
 | 2168 | 2 |
 | 1127 | 2 |
 | 1755 | 2 |
 | 2034 | 2 |
 | 1897 | 2 |
 | 569 | 2 |
 | 1442 | 2 |
 | 747 | 2 |
 | 1299 | 2 |
 | 2414 | 2 |
 | 629 | 2 |
 | 1056 | 2 |
 | 189 | 1 |
 | 1078 | 1 |
 | 979 | 1 |
 | 891 | 1 |
 | 560 | 1 |
 | 2122 | 1 |
 | 289 | 1 |
 | 1291 | 1 |
 | 928 | 1 |
 | 398 | 1 |
 | 1475 | 1 |
 | 874 | 1 |
 | 2147 | 1 |
 | 2263 | 1 |
 | 2170 | 1 |
 | 2355 | 1 |
 | 223 | 1 |
 | 862 | 1 |
 | 2197 | 1 |
 | 497 | 1 |
 | 2062 | 1 |
 | 1943 | 1 |
 | 1795 | 1 |
 | 1990 | 1 |
 | 15 | 1 |
 | 1931 | 1 |
 | 577 | 1 |
 | 1358 | 1 |
 | 2349 | 1 |
 | 1976 | 1 |
 | 1705 | 1 |
 | 1796 | 1 |
 | 2136 | 1 |
 | 1243 | 1 |
 | 1848 | 1 |
 | 2449 | 1 |
 | 239 | 1 |
 | 1872 | 1 |
 | 1732 | 1 |
 | 1404 | 1 |
Resources
BED file downloads
Connects to 87 DHS sitesTop 10 Correlated DHS Sites
p-values indiciate significant higher or lower correlation| Location | Cluster | P-value |
|---|---|---|
| chr20:49092440-49092590 | 1243 | 0 |
| chr20:49187040-49187190 | 223 | 0 |
| chr20:49178465-49178615 | 1475 | 0.001 |
| chr20:49137265-49137415 | 2168 | 0.001 |
| chr20:49211220-49211370 | 1404 | 0.001 |
| chr20:49212280-49212430 | 1127 | 0.001 |
| chr20:49056220-49056370 | 1976 | 0.003 |
| chr20:49109120-49109270 | 1897 | 0.003 |
| chr20:49157000-49157150 | 1705 | 0.004 |
| chr20:49259640-49259790 | 862 | 0.004 |
| chr20:49212465-49212615 | 629 | 0.004 |
External Databases
UCSCEnsembl (ENSG00000196396)